Hi Dan..

I have a boyds stock and was having issues similar to yours. My rifle had the factory stock bedded and was shooting sub moa's 1/2 at 100 yards. But I did not like the factory stock so went with boyds. Groups were all over the place, so I had it bedded. A little better bout barely 1.5 inch groups. A gentleman here suggested that I check the clearance of the recoil lug. Sure enough it was touching the bottom of the stock, so I took my dremel and removed some of the wood where the recoil lug would not bottom out. Rifle shot groups closer than ever. I am not sure how this helps, but on my boyds stock, it did.. Good luck.